C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: prothymosin, alpha pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000397627 PTMAP2-001 ENSG00000197744 9606 + 5:118973796-118974122 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000397627
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000397627 1.892±0.00 2.388±0.00 1.116±0.00 0.285±0.00 0.782±0.00 1.748±0.00 0.500±0.00 0.119±0.00 0.340±0.00 0.660±0.00 0.107±0.00 0.429±0.36 0.304±0.18 0.700±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004LA CIL_0004LA_0001 CGP 5:118837322-119249138

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000186255 Ptma-005 protein_coding Mus_musculus 9.99995e-41 171
ENSMUST00000188699 Ptma-003 protein_coding Mus_musculus 0 200
ENSMUST00000179994 Gm6291-201 processed_pseudogene Mus_musculus 0 324
ENSMUST00000175818 Gm19815-001 processed_pseudogene Mus_musculus 0 403
ENSMUST00000120860 Gm12504-002 processed_transcript Mus_musculus 0 250
ENSMUST00000148026 Gm12504-001 transcribed_processed_pseudogene Mus_musculus 0 250

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