C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: predicted gene, 19815
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000175818 Gm19815-001 ENSMUSG00000093716 10090 - 17:90567423-90567757 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENSMUST00000175818
Transcript ID Brain
ENSMUST00000175818 0.472±0.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UZ CIL_0007UZ_0002 VISTA 17:90395304-90998017

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000341369 PTMA-002 protein_coding Homo_sapiens 0 420
ENST00000397627 PTMAP2-001 processed_pseudogene Homo_sapiens 0 403
ENST00000397729 PTMAP8-001 processed_pseudogene Homo_sapiens 0 326
ENST00000409115 PTMA-001 protein_coding Homo_sapiens 0 412
ENST00000409321 PTMA-012 protein_coding Homo_sapiens 0 401
ENST00000409683 PTMA-007 protein_coding Homo_sapiens 0 359
ENST00000410064 PTMA-004 protein_coding Homo_sapiens 0 377
ENST00000411648 PTMAP1-001 processed_pseudogene Homo_sapiens 0 191
ENST00000412128 PTMA-008 protein_coding Homo_sapiens 0 375
ENST00000442851 PTMAP1-001 processed_pseudogene Homo_sapiens 0 191
ENST00000444251 PTMAP1-001 processed_pseudogene Homo_sapiens 0 191
ENST00000447774 PTMAP1-001 processed_pseudogene Homo_sapiens 0 191
ENST00000448874 PTMA-011 nonsense_mediated_decay Homo_sapiens 0 375
ENST00000455552 PTMAP1-001 processed_pseudogene Homo_sapiens 0 191
ENST00000456700 PTMAP1-001 processed_pseudogene Homo_sapiens 0 191
ENST00000457022 PTMAP1-001 processed_pseudogene Homo_sapiens 0 191
ENST00000466801 PTMA-013 processed_transcript Homo_sapiens 0 375
ENST00000467816 PTMA-010 retained_intron Homo_sapiens 0 196
ENST00000468027 PTMA-006 retained_intron Homo_sapiens 0 337
ENST00000481928 PTMA-003 retained_intron Homo_sapiens 0 315
ENST00000602494 RP11-330M2.4-001 processed_pseudogene Homo_sapiens 0 326
ENST00000612829 PTMA-201 protein_coding Homo_sapiens 0 370

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