C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000397854 ITGB2-003 ENSG00000160255 9606 - 21:44885953-44920855 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000397854
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000397854 16.479±0.00 29.169±0.00 4.996±0.00 6.028±0.00 2.871±0.00 4.510±0.00 5.345±0.00 2.560±0.00 13.154±0.00 2.221±0.00 6.940±0.00 7.348±0.00 5.213±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004872 IEA receptor activity
GO:0007160 IEA cell-matrix adhesion
GO:0007229 IEA integrin-mediated signaling pathway
GO:0007275 IEA multicellular organismal development
GO:0008305 IEA integrin complex
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000000299 Itgb2-001 protein_coding Mus_musculus 0 1452
ENSMUST00000113773 Itgb2l-002 protein_coding Mus_musculus 0 630
ENSMUST00000000161 Itgb2l-001 protein_coding Mus_musculus 0 630
ENSMUST00000131567 Itgb2l-003 nonsense_mediated_decay Mus_musculus 0 628
ENSMUST00000131777 Itgb2l-004 processed_transcript Mus_musculus 0 425
ENSMUST00000153541 Itgb2-003 nonsense_mediated_decay Mus_musculus 0 350
ENSMUST00000156644 Itgb2-002 nonsense_mediated_decay Mus_musculus 0 350

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