C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MAM domain containing glycosylphosphatidylinositol anchor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000399232 MDGA2-001 ENSG00000139915 9606 - 14:46840092-47674954 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartKidneyLiverOvaryTestisENST00000399232
Transcript ID Brain Colon Heart Kidney Liver Ovary Testis
ENST00000399232 0.791±0.00 0.034±0.02 0.018±0.00 0.018±0.00 0.047±0.00 0.016±0.00 0.346±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00046T CIL_00046T_0001 CGP 14:46651010-47674954
CIL_0005Q4 CIL_0005Q4_0001 CGP 14:46839629-49599164

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0007389 IEA pattern specification process
GO:0016020 IEA membrane
GO:0021522 ISS spinal cord motor neuron differentiation
GO:0031225 IEA anchored component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037181 Mdga2-002 protein_coding Mus_musculus 0 5049
ENSMUST00000178814 Mdga2-001 protein_coding Mus_musculus 0 4451
ENSMUST00000101379 Mdga2-007 nonsense_mediated_decay Mus_musculus 0 4165
ENSMUST00000177690 Mdga2-006 processed_transcript Mus_musculus 0 743
ENSMUST00000179025 Mdga2-005 processed_transcript Mus_musculus 0 427
ENSMUST00000179577 Mdga2-004 processed_transcript Mus_musculus 0 427
ENSMUST00000113942 Mdga2-201 protein_coding Mus_musculus 0 248

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