C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 4 (anion exchanger), member 1 (Diego blood group)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000399246 SLC4A1-201 ENSG00000004939 9606 - 17:44248390-44268134 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonLiverMuscleOvaryPlacentaTestisENST00000399246
Transcript ID Adrenal Brain Breast Colon Liver Muscle Ovary Placenta Testis
ENST00000399246 0.082±0.00 0.040±0.03 0.020±0.00 0.658±0.00 0.026±0.00 0.097±0.00 0.051±0.00 5.307±0.00 0.342±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B6 CIL_0009B6_0001 VISTA 17:43966083-44567774
CIL_0004D5 CIL_0004D5_0002 CGP 17:44205033-44268141
CIL_0007ST CIL_0007ST_0001 VISTA 17:44247434-44848646
CIL_0005JA CIL_0005JA_0001 CGP 17:44248385-44318671

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0006810 IEA transport
GO:0006820 IEA anion transport
GO:0008509 IEA anion transmembrane transporter activity
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000006749 Slc4a1-001 protein_coding Mus_musculus 0 1014

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