C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SET domain containing 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000399686 SETD5-015 ENSG00000168137 9606 + 3:9442167-9479240 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004QC CIL_0004QC_0001 CGP 3:9362842-9479240
CIL_0002W7 CIL_0002W7_0001 CGP 3:9397615-9553802

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113157 Setd5-201 protein_coding Mus_musculus 0 3500
ENSMUST00000149584 Setd5-008 retained_intron Mus_musculus 0 3500
ENSMUST00000142215 Setd5-006 processed_transcript Mus_musculus 0 3500
ENSMUST00000113155 Setd5-002 protein_coding Mus_musculus 0 3500
ENSMUST00000042889 Setd5-001 protein_coding Mus_musculus 0 3500
ENSMUST00000153513 Setd5-011 processed_transcript Mus_musculus 0 2241
ENSMUST00000150107 Setd5-010 retained_intron Mus_musculus 0 1801
ENSMUST00000141072 Setd5-005 retained_intron Mus_musculus 0 1011
ENSMUST00000124467 Setd5-007 retained_intron Mus_musculus 0 593
ENSMUST00000138327 Setd5-009 retained_intron Mus_musculus 0 545
ENSMUST00000156048 Setd5-013 processed_transcript Mus_musculus 0 363
ENSMUST00000125003 Setd5-012 processed_transcript Mus_musculus 0 309
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.000005 58
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.00002 57

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