C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ubiquitin specific peptidase 16
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000399973 USP16-006 ENSG00000156256 9606 + 21:29024656-29034919 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENST00000399973
Transcript ID Ovary
ENST00000399973 17.811±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003CH CIL_0003CH_0001 CGP 21:29004384-29054488
CIL_000313 CIL_000313_0001 CGP 21:29024629-29073797

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000144759 Usp16-004 nonsense_mediated_decay Mus_musculus 0 370
ENSMUST00000131206 Usp16-003 retained_intron Mus_musculus 0 370
ENSMUST00000119504 Usp16-006 protein_coding Mus_musculus 0 370
ENSMUST00000026710 Usp16-001 protein_coding Mus_musculus 0 370
ENSMUST00000177538 Usp16-011 processed_transcript Mus_musculus 2e-17 94

Loading