C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SKI family transcriptional corepressor 1a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000100104 skor1a-001 ENSDARG00000069030 7955 - 7:35289896-35296061 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartMuscleENSDART00000100104
Transcript ID Brain Heart Muscle
ENSDART00000100104 0.604±0.33 0.019±0.00 0.045±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00050U CIL_00050U_0001 CGP 7:35221111-35296061
CIL_0004FE CIL_0004FE_0001 CGP 7:35289896-35405850

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005634 IEA nucleus
GO:0008150 ND biological_process
GO:0046332 IEA SMAD binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000055281 Skor1-002 protein_coding Mus_musculus 0 243
ENSMUST00000116613 Skor1-003 protein_coding Mus_musculus 0 243
ENSMUST00000119146 Skor1-001 protein_coding Mus_musculus 0 243
ENST00000341418 SKOR1-001 protein_coding Homo_sapiens 0 265
ENST00000380035 SKOR1-003 protein_coding Homo_sapiens 0 265
ENST00000400404 SKOR2-001 protein_coding Homo_sapiens 0 431
ENST00000425639 SKOR2-002 protein_coding Homo_sapiens 0 431
ENST00000554054 SKOR1-004 protein_coding Homo_sapiens 0 265
ENST00000554240 SKOR1-002 protein_coding Homo_sapiens 0 265
ENST00000620245 SKOR2-201 protein_coding Homo_sapiens 0 431

Loading