C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SAM domain, SH3 domain and nuclear localization signals 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000400566 SAMSN1-002 ENSG00000155307 9606 - 21:14485228-14546343 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000400566
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000400566 3.686±0.00 5.677±0.00 0.558±0.00 1.092±0.00 1.656±1.08 0.649±0.33 0.713±0.60 1.861±0.34 1.063±0.07 6.054±2.71 0.021±0.00 1.008±0.26 1.652±0.31 0.500±0.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000MS CIL_0000MS_0002 CGP 21:14371115-14583402

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001784 IDA phosphotyrosine binding
GO:0002820 ISS negative regulation of adaptive immune response
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0042995 IEA cell projection
GO:0044822 IDA poly(A) RNA binding
GO:0050732 ISS negative regulation of peptidyl-tyrosine phosphorylation
GO:0050869 ISS negative regulation of B cell activation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114239 Samsn1-003 protein_coding Mus_musculus 0 1099
ENSMUST00000114240 Samsn1-001 protein_coding Mus_musculus 0 981
ENSMUST00000147447 Samsn1-006 retained_intron Mus_musculus 0 351
ENSMUST00000139691 Samsn1-004 retained_intron Mus_musculus 0 348

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