C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: cat eye syndrome chromosome region, candidate 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000400585 CECR2-002 ENSG00000099954 9606 + 22:17359949-17553332 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonLiverENST00000400585
Transcript ID Breast Colon Liver
ENST00000400585 0.083±0.02 0.104±0.00 0.121±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002E1 CIL_0002E1_0001 CGP 22:17359949-17590994

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0021915 IEA neural tube development
GO:0043044 IEA ATP-dependent chromatin remodeling
GO:0090537 IEA CERF complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100993 Cecr2-002 protein_coding Mus_musculus 0 2093
ENSMUST00000112686 Cecr2-001 protein_coding Mus_musculus 0 1927
ENSMUST00000143563 Cecr2-007 protein_coding Mus_musculus 0 765
ENSMUST00000124634 Cecr2-006 processed_transcript Mus_musculus 0 754
ENSMUST00000129803 Cecr2-005 protein_coding Mus_musculus 0 512
ENSMUST00000148346 Cecr2-003 retained_intron Mus_musculus 1e-33 150
ENSMUST00000135109 Cecr2-004 processed_transcript Mus_musculus 4e-33 148

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