C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002E1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000099954-ENSG00000182902 CGP 9606 22:17359949-17590994
GeneTranscriptPositionBiotype
ENSG00000099954 (CECR2)
cat eye syndrome chromosome region, candidate 2 		ENST00000262608 (CECR2-201) 17369784-17554145 protein_coding
ENST00000342247 (CECR2-202) 17369366-17554145 protein_coding
ENST00000355219 (CECR2-004) 17548999-17554133 nonsense_mediated_decay
ENST00000400585 (CECR2-002) 17359949-17553332 protein_coding
ENST00000497534 (CECR2-003) 17428273-17499458 processed_transcript
ENST00000612582 (CECR2-001) 17477093-17558149 protein_coding
ENSG00000182902 (SLC25A18)
solute carrier family 25 (glutamate carrier), member 18 		ENST00000327451 (SLC25A18-001) 17563439-17590994 protein_coding
ENST00000399813 (SLC25A18-002) 17563450-17590881 protein_coding
ENST00000467228 (SLC25A18-003) 17563589-17582208 retained_intron
ENST00000469889 (SLC25A18-005) 17569707-17570393 processed_transcript
ENST00000496051 (SLC25A18-004) 17563464-17570256 processed_transcript
ENST00000497401 (SLC25A18-006) 17569701-17583484 processed_transcript
ENSG00000228045 (DNAJA1P6)
DnaJ (Hsp40) homolog, subfamily A, member 1 pseudogene 6 		ENST00000437347 (DNAJA1P6-001) 17518676-17519029 processed_pseudogene
ENSG00000229492 (AC004019.10)
 ENST00000455617 (AC004019.10-001) 17418697-17419828 processed_pseudogene
ENSG00000232305 (CLCP1)
Charcot-Leyden crystal protein pseudogene 1 		ENST00000455251 (CLCP1-001) 17424388-17424775 processed_pseudogene
ENSG00000236754 (AC004019.13)
 ENST00000443935 (AC004019.13-001) 17580157-17589192 antisense
ENST00000611039 (AC004019.13-201) 17580314-17588018 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0002E1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000071226-ENSMUSG00000004902 CGP 10090 6:120666369-120793982
GeneTranscriptPositionBiotype
ENSMUSG00000004902 (Slc25a18)
solute carrier family 25 (mitochondrial carrier), member 18 		ENSMUST00000112682 (Slc25a18-201) 120773768-120793982 protein_coding
ENSMUSG00000071226 (Cecr2)
cat eye syndrome chromosome region, candidate 2 		ENSMUST00000100993 (Cecr2-002) 120666582-120766904 protein_coding
ENSMUST00000112686 (Cecr2-001) 120666421-120771190 protein_coding
ENSMUST00000124634 (Cecr2-006) 120734558-120756674 processed_transcript
ENSMUST00000129803 (Cecr2-005) 120734625-120755548 protein_coding
ENSMUST00000135109 (Cecr2-004) 120666535-120724748 processed_transcript
ENSMUST00000143563 (Cecr2-007) 120758135-120761717 protein_coding
ENSMUST00000148346 (Cecr2-003) 120666369-120724920 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002E1_0001ENSG00000099954ENST00000262608ENST00000342247ENST00000355219ENST00000400585ENST00000497534ENST00000612582ENSG00000182902ENST00000327451ENST00000399813ENST00000467228ENST00000469889ENST00000496051ENST00000497401ENSG00000228045ENST00000437347ENSG00000229492ENST00000455617ENSG00000232305ENST00000455251ENSG00000236754ENST00000443935ENST00000611039CIL_0002E1_0002ENSMUSG00000004902ENSMUST00000112682ENSMUSG00000071226ENSMUST00000100993ENSMUST00000112686ENSMUST00000124634ENSMUST00000129803ENSMUST00000135109ENSMUST00000143563ENSMUST00000148346
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002E1_0001ENSG00000099954ENST00000262608ENST00000342247ENST00000355219ENST00000400585ENST00000612582ENSG00000182902ENST00000327451ENST00000399813ENST00000467228ENST00000496051ENST00000497401ENSG00000228045ENST00000437347ENSG00000229492ENST00000455617ENSG00000232305ENST00000455251ENSG00000236754ENST00000443935CIL_0002E1_0002ENSMUSG00000004902ENSMUST00000112682ENSMUSG00000071226ENSMUST00000100993ENSMUST00000112686ENSMUST00000143563
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000099954 ENST00000262608 N/A N/A N/A 0.104±0.00 0.019±0.00 N/A N/A N/A 0.198±0.00 N/A 0.672±0.00 0.104±0.00 N/A 1.104±0.00
ENST00000342247 0.067±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000355219 N/A N/A 0.460±0.00 N/A 0.093±0.00 N/A N/A N/A N/A N/A N/A 0.302±0.00 N/A N/A
ENST00000400585 N/A N/A N/A N/A 0.083±0.02 0.104±0.00 N/A N/A 0.121±0.00 N/A N/A N/A N/A N/A
ENST00000497534 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612582 0.171±0.00 N/A N/A 0.541±0.00 0.022±0.00 0.031±0.00 0.979±0.00 0.609±0.00 0.867±0.00 N/A 0.655±0.43 0.142±0.03 0.119±0.02 1.528±0.19
ENSG00000182902 ENST00000327451 1.396±0.00 0.484±0.00 N/A 19.640±5.66 1.774±0.00 N/A 0.178±0.00 2.524±0.72 0.222±0.00 N/A 0.878±0.00 N/A 0.253±0.00 N/A
ENST00000399813 0.598±0.00 N/A N/A 13.768±10.66 N/A 0.345±0.13 N/A 1.566±0.00 12.833±0.00 0.124±0.00 N/A 0.913±0.00 0.127±0.00 N/A
ENST00000467228 0.526±0.00 N/A N/A N/A N/A N/A 0.047±0.00 N/A N/A 0.066±0.00 N/A N/A N/A N/A
ENST00000469889 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496051 N/A N/A N/A N/A 0.885±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497401 N/A N/A N/A N/A N/A N/A N/A N/A 0.160±0.00 N/A 0.426±0.00 N/A N/A 5.701±0.00
ENSG00000228045 ENST00000437347 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.095±0.06
ENSG00000229492 ENST00000455617 N/A 0.163±0.00 0.051±0.00 0.174±0.00 0.266±0.00 0.511±0.00 0.131±0.03 0.623±0.00 0.052±0.00 0.251±0.21 N/A 0.066±0.02 0.779±0.00 0.479±0.04
ENSG00000232305 ENST00000455251 N/A N/A N/A 0.268±0.00 N/A N/A N/A N/A 0.176±0.00 N/A N/A N/A N/A N/A
ENSG00000236754 ENST00000443935 0.520±0.00 0.714±0.00 0.438±0.00 N/A 0.589±0.00 0.360±0.00 0.506±0.00 0.598±0.00 N/A 0.224±0.00 0.233±0.00 0.080±0.00 N/A 0.493±0.00
ENST00000611039 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000004902 ENSMUST00000112682 0.100±0.05 0.380±0.14 0.038±0.00 17.626±20.84 0.140±0.10 0.053±0.02 0.104±0.02 0.039±0.01 0.111±0.07 0.291±0.05 0.069±0.02 3.459±1.76 0.236±0.07 1.967±0.37
ENSMUSG00000071226 ENSMUST00000100993 0.773±0.25 1.011±0.17 0.320±0.00 0.730±0.06 2.750±0.27 0.096±0.05 1.235±0.29 1.075±0.31 1.352±0.46 1.935±0.33 0.515±0.09 1.406±0.49 3.099±2.81 6.551±1.92
ENSMUST00000112686 0.639±0.00 0.598±0.16 0.410±0.06 0.532±0.19 0.991±0.34 0.070±0.03 0.324±0.00 0.571±0.29 1.283±0.81 0.889±0.27 0.732±0.51 0.322±0.04 0.953±0.70 1.694±0.61
ENSMUST00000124634 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129803 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135109 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143563 N/A 0.867±0.11 N/A N/A N/A 0.102±0.00 N/A N/A N/A N/A N/A 1.065±0.00 N/A N/A
ENSMUST00000148346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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