C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: paired box 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000400661 PAX7-003 ENSG00000009709 9606 + 1:18631524-18736102 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000400661
Transcript ID Muscle
ENST00000400661 1.483±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098Z CIL_00098Z_0001 VISTA 1:18089892-18691429
CIL_0008CW CIL_0008CW_0001 VISTA 1:18332177-18933790

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0009653 TAS anatomical structure morphogenesis
GO:0043066 TAS negative regulation of apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030508 Pax7-001 protein_coding Mus_musculus 0 1864
ENSMUST00000174681 Pax7-002 protein_coding Mus_musculus 0 1836
ENSMUST00000004994 Pax3-002 protein_coding Mus_musculus 0 593
ENSMUST00000087086 Pax3-001 protein_coding Mus_musculus 0 592
ENSMUST00000172555 Pax3-003 processed_transcript Mus_musculus 0 409

Loading