C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S27 pseudogene 15
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000402023 RPS27P15-001 ENSG00000218459 9606 + 6:73618346-73618597 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartMuscleOvaryTestisENST00000402023
Transcript ID Adipose Adrenal Brain Breast Colon Heart Muscle Ovary Testis
ENST00000402023 0.182±0.00 0.384±0.00 0.066±0.00 0.128±0.00 0.355±0.00 0.285±0.00 0.550±0.00 2.101±0.60 0.103±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006PR CIL_0006PR_0001 CGP 6:73515750-73654155
CIL_0006PQ CIL_0006PQ_0001 CGP 6:73593379-73828316

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000053150 Rps27rt-001 protein_coding Mus_musculus 0 318
ENSMUST00000170122 Rps27-201 protein_coding Mus_musculus 0 318
ENSMUST00000173599 Gm19246-001 processed_pseudogene Mus_musculus 0 268
ENSMUST00000121307 Gm13009-001 processed_pseudogene Mus_musculus 0 244
ENSMUST00000119164 Gm11572-001 processed_pseudogene Mus_musculus 2e-33 145

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