C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11572
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119164 Gm11572-001 ENSMUSG00000084368 10090 - 11:97116796-97116915 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WA CIL_0007WA_0002 VISTA 11:96526222-97127190
CIL_0007RQ CIL_0007RQ_0002 VISTA 11:96583318-97187851

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000368567 RPS27-001 protein_coding Homo_sapiens 7.00649e-45 183
ENST00000392558 RPS27-002 protein_coding Homo_sapiens 2e-37 159
ENST00000402023 RPS27P15-001 processed_pseudogene Homo_sapiens 2e-33 145
ENST00000422457 RP11-175B9.3-001 processed_pseudogene Homo_sapiens 5.60519e-45 183
ENST00000423216 RP3-423B22.5-001 processed_pseudogene Homo_sapiens 2.00386e-43 178
ENST00000425207 AC002075.4-001 processed_pseudogene Homo_sapiens 3e-37 158
ENST00000434429 RP11-20O24.1-001 processed_pseudogene Homo_sapiens 5e-35 150
ENST00000455497 RP11-360D2.2-001 processed_pseudogene Homo_sapiens 5e-40 167
ENST00000457554 RP11-761N21.2-001 processed_pseudogene Homo_sapiens 5.60519e-45 183
ENST00000463110 RPS27P29-001 processed_pseudogene Homo_sapiens 3e-37 158
ENST00000469695 AC090602.2-001 processed_pseudogene Homo_sapiens 2.00386e-43 178
ENST00000477151 RPS27-004 processed_transcript Homo_sapiens 9.80909e-45 183
ENST00000480875 RP11-10G12.1-001 processed_pseudogene Homo_sapiens 9.99967e-42 172
ENST00000486977 RP11-25I15.1-001 processed_pseudogene Homo_sapiens 9.99967e-42 172
ENST00000487608 RPS27P23-001 processed_pseudogene Homo_sapiens 1e-36 156
ENST00000493224 RPS27-003 processed_transcript Homo_sapiens 9.80909e-45 183
ENST00000495392 RP11-543P15.1-001 processed_pseudogene Homo_sapiens 5.60519e-45 183

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