C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene, 19246
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000173599 Gm19246-001 ENSMUSG00000092505 10090 + 7:42488801-42489055 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleOvaryPlacentaTestisENSMUST00000173599
Transcript ID Muscle Ovary Placenta Testis
ENSMUST00000173599 0.329±0.00 0.704±0.00 0.055±0.00 0.316±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000368567 RPS27-001 protein_coding Homo_sapiens 0 346
ENST00000392558 RPS27-002 protein_coding Homo_sapiens 1.4013e-45 187
ENST00000402023 RPS27P15-001 processed_pseudogene Homo_sapiens 0 268
ENST00000422457 RP11-175B9.3-001 processed_pseudogene Homo_sapiens 0 346
ENST00000423216 RP3-423B22.5-001 processed_pseudogene Homo_sapiens 0 329
ENST00000425207 AC002075.4-001 processed_pseudogene Homo_sapiens 0 309
ENST00000426040 AC098614.1-001 processed_pseudogene Homo_sapiens 0 274
ENST00000434429 RP11-20O24.1-001 processed_pseudogene Homo_sapiens 0 298
ENST00000438127 AP000936.1-001 processed_pseudogene Homo_sapiens 0 335
ENST00000455497 RP11-360D2.2-001 processed_pseudogene Homo_sapiens 0 309
ENST00000457554 RP11-761N21.2-001 processed_pseudogene Homo_sapiens 0 346
ENST00000463110 RPS27P29-001 processed_pseudogene Homo_sapiens 0 315
ENST00000469695 AC090602.2-001 processed_pseudogene Homo_sapiens 0 283
ENST00000477151 RPS27-004 processed_transcript Homo_sapiens 0 335
ENST00000480875 RP11-10G12.1-001 processed_pseudogene Homo_sapiens 0 307
ENST00000486977 RP11-25I15.1-001 processed_pseudogene Homo_sapiens 0 333
ENST00000487608 RPS27P23-001 processed_pseudogene Homo_sapiens 0 265
ENST00000493224 RPS27-003 processed_transcript Homo_sapiens 0 335
ENST00000495392 RP11-543P15.1-001 processed_pseudogene Homo_sapiens 0 340
ENST00000496370 RPS27P14-001 processed_pseudogene Homo_sapiens 0 257
ENST00000604416 RP11-1029M24.4-001 processed_pseudogene Homo_sapiens 2e-34 148
ENST00000611920 RPS27P14-001 processed_pseudogene Homo_sapiens 0 257

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