C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000402406 RP11-307I14.2-001 ENSG00000220105 9606 - 9:4781475-4782078 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastKidneyMusclePlacentaTestisENST00000402406
Transcript ID Adipose Adrenal Brain Breast Kidney Muscle Placenta Testis
ENST00000402406 0.051±0.00 0.056±0.00 0.030±0.00 0.029±0.00 0.028±0.00 0.093±0.00 0.094±0.00 0.050±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003YJ CIL_0003YJ_0001 CGP 9:4709559-4885917

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000004554 Rps5-001 protein_coding Mus_musculus 0 553
ENSMUST00000108539 Rps5-002 protein_coding Mus_musculus 0 553
ENSMUST00000137329 Rps5-004 protein_coding Mus_musculus 0 494
ENSMUST00000147435 Rps5-003 protein_coding Mus_musculus 0 494
ENSMUST00000139349 Rps5-006 retained_intron Mus_musculus 0 392

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