C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SUMO2 pseudogene 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000403109 SUMO2P13-001 ENSG00000218359 9606 + 6:17582034-17582305 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENST00000403109
Transcript ID Ovary Testis
ENST00000403109 0.144±0.02 0.788±0.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009C9 CIL_0009C9_0001 VISTA 6:17172901-17774881
CIL_0008JF CIL_0008JF_0001 VISTA 6:17172919-17774874
CIL_0008B7 CIL_0008B7_0001 VISTA 6:17234961-17839440
CIL_0003RP CIL_0003RP_0001 CGP 6:17393216-17611719
CIL_00081D CIL_00081D_0001 VISTA 6:17414467-18016353

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118989 Gm13690-001 processed_pseudogene Mus_musculus 0 233
ENSMUST00000121003 Gm11829-001 processed_pseudogene Mus_musculus 0 217
ENSMUST00000119430 Samd8-003 protein_coding Mus_musculus 3.00018e-42 174

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