C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003RP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000112186-ENSG00000137414 CGP 9606 6:17393216-17611719
GeneTranscriptPositionBiotype
ENSG00000112186 (CAP2)
CAP, adenylate cyclase-associated protein, 2 (yeast) 		ENST00000229922 (CAP2-001) 17393216-17557792 protein_coding
ENST00000378990 (CAP2-006) 17393645-17556795 protein_coding
ENST00000465994 (CAP2-007) 17393712-17556568 protein_coding
ENST00000476263 (CAP2-008) 17393732-17539290 nonsense_mediated_decay
ENST00000479291 (CAP2-005) 17393712-17551570 nonsense_mediated_decay
ENST00000489374 (CAP2-003) 17393633-17556659 protein_coding
ENST00000493172 (CAP2-004) 17393663-17556564 protein_coding
ENST00000611958 (CAP2-201) 17393595-17557790 protein_coding
ENST00000616440 (CAP2-202) 17393505-17557790 protein_coding
ENSG00000137414 (FAM8A1)
family with sequence similarity 8, member A1 		ENST00000259963 (FAM8A1-001) 17600355-17611719 protein_coding
ENSG00000184612 (RPL7P26)
ribosomal protein L7 pseudogene 26 		ENST00000333817 (RPL7P26-001) 17530899-17531652 processed_pseudogene
ENSG00000218359 (SUMO2P13)
SUMO2 pseudogene 13 		ENST00000403109 (SUMO2P13-001) 17582034-17582305 processed_pseudogene
CIL_0003RP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021373-ENSMUSG00000069237 CGP 10090 13:46501848-46678056
GeneTranscriptPositionBiotype
ENSMUSG00000021373 (Cap2)
CAP, adenylate cyclase-associated protein, 2 (yeast) 		ENSMUST00000021802 (Cap2-001) 46501848-46649642 protein_coding
ENSMUST00000119341 (Cap2-002) 46502125-46649635 protein_coding
ENSMUST00000126687 (Cap2-003) 46640058-46646572 processed_transcript
ENSMUSG00000069237 (C78339)
expressed sequence C78339 		ENSMUST00000099547 (C78339-001) 46669522-46678056 protein_coding
ENSMUST00000150376 (C78339-002) 46671191-46673814 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003RP_0001ENSG00000112186ENST00000229922ENST00000378990ENST00000465994ENST00000476263ENST00000479291ENST00000489374ENST00000493172ENST00000611958ENST00000616440ENSG00000137414ENST00000259963ENSG00000184612ENST00000333817ENSG00000218359ENST00000403109CIL_0003RP_0002ENSMUSG00000021373ENSMUST00000021802ENSMUST00000119341ENSMUST00000126687ENSMUSG00000069237ENSMUST00000099547ENSMUST00000150376
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003RP_0001ENSG00000112186ENST00000229922ENST00000378990ENST00000465994ENST00000476263ENST00000489374ENST00000493172ENST00000611958ENST00000616440ENSG00000137414ENST00000259963ENSG00000184612ENST00000333817ENSG00000218359ENST00000403109CIL_0003RP_0002ENSMUSG00000021373ENSMUST00000021802ENSMUST00000119341ENSMUSG00000069237ENSMUST00000099547ENSMUST00000150376
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000112186 ENST00000229922 0.365±0.00 N/A N/A 18.701±0.00 3.959±2.74 0.907±0.00 4.762±0.73 1.888±0.00 1.727±1.65 0.655±0.00 25.410±8.92 2.575±0.00 2.705±0.61 0.630±0.42
ENST00000378990 0.257±0.00 3.391±0.00 N/A 29.931±0.00 3.142±2.81 12.464±0.00 14.123±0.00 N/A N/A N/A 91.042±0.00 1.017±0.73 0.886±0.00 2.738±2.53
ENST00000465994 0.704±0.00 N/A N/A 19.854±0.00 0.835±0.00 0.643±0.00 4.389±0.00 0.098±0.00 4.344±0.00 0.221±0.00 25.741±0.00 1.029±0.00 1.529±0.00 0.596±0.00
ENST00000476263 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.180±0.00 N/A N/A N/A N/A
ENST00000479291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489374 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.135±0.00 N/A 0.971±0.00 N/A N/A
ENST00000493172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.374±0.00 1.609±0.00 N/A
ENST00000611958 0.295±0.00 2.438±0.00 0.392±0.00 27.471±0.00 6.899±0.00 12.238±0.00 14.950±0.00 1.801±1.50 0.508±0.00 1.542±0.00 112.204±0.00 2.282±0.00 1.575±0.03 4.154±0.00
ENST00000616440 N/A 0.676±0.00 N/A N/A N/A 0.188±0.00 N/A N/A N/A N/A N/A 0.150±0.00 N/A N/A
ENSG00000137414 ENST00000259963 10.141±0.00 2.980±0.00 4.027±0.00 10.193±2.89 5.711±3.23 8.091±2.52 3.726±2.04 11.226±1.77 7.804±4.42 6.861±1.53 4.253±2.54 7.935±2.57 3.822±0.57 9.277±4.23
ENSG00000184612 ENST00000333817 0.065±0.00 0.139±0.00 N/A 0.190±0.00 0.170±0.00 0.100±0.00 0.087±0.07 0.104±0.00 0.786±0.00 N/A 0.485±0.09 0.231±0.11 0.094±0.00 N/A
ENSG00000218359 ENST00000403109 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.144±0.02 N/A 0.788±0.32
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021373 ENSMUST00000021802 7.161±5.99 0.653±0.24 44.505±3.56 6.658±5.45 4.664±4.38 3.629±0.87 27.840±3.14 0.671±0.23 0.325±0.19 4.083±1.44 61.239±6.70 5.800±2.49 0.684±0.75 6.675±0.84
ENSMUST00000119341 N/A N/A N/A 37.042±0.00 N/A N/A N/A N/A 0.024±0.00 N/A N/A 2.481±0.00 0.200±0.10 4.692±0.00
ENSMUST00000126687 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000069237 ENSMUST00000099547 15.748±1.23 19.511±9.41 24.451±0.68 19.530±7.92 10.252±3.85 12.691±8.27 5.762±0.24 12.989±1.62 8.996±2.22 15.131±3.57 7.282±1.18 12.069±8.40 12.162±3.64 11.545±5.21
ENSMUST00000150376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 28.694±0.00

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