C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13690
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118989 Gm13690-001 ENSMUSG00000086436 10090 - 2:80629284-80629568 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000118989
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000118989 1.248±0.64 1.469±0.67 1.116±0.31 1.513±0.10 1.665±0.70 1.807±0.33 0.851±0.45 0.473±0.25 0.558±0.25 1.352±0.53 0.546±0.17 1.591±0.73 0.555±0.18 0.959±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000Q8 CIL_0000Q8_0002 CGP 2:80500512-80632361
CIL_0000Q9 CIL_0000Q9_0002 CGP 2:80617045-80658906
CIL_0000QA CIL_0000QA_0002 CGP 2:80617236-82259879

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314523 SUMO2-002 protein_coding Homo_sapiens 0 250
ENST00000326669 SUMO4-001 protein_coding Homo_sapiens 0 361
ENST00000403109 SUMO2P13-001 processed_pseudogene Homo_sapiens 0 233
ENST00000404494 RP3-509I19.6-001 transcribed_processed_pseudogene Homo_sapiens 0 255
ENST00000405924 SUMO2P12-001 processed_pseudogene Homo_sapiens 7.00005e-41 169
ENST00000414746 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 418
ENST00000417139 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 418
ENST00000418008 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 418
ENST00000420826 SUMO2-001 protein_coding Homo_sapiens 0 449
ENST00000427515 RP11-184I16.3-001 processed_pseudogene Homo_sapiens 0 237
ENST00000428065 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 418
ENST00000428741 RP11-4K3__A.3-001 processed_pseudogene Homo_sapiens 0 281
ENST00000434672 SUMO2P8-001 processed_pseudogene Homo_sapiens 0 348
ENST00000436431 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 418
ENST00000438311 SUMO2P3-001 processed_pseudogene Homo_sapiens 0 394
ENST00000443604 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 418
ENST00000445436 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 418
ENST00000452006 SUMO2P10-001 processed_pseudogene Homo_sapiens 0 337
ENST00000455040 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 418
ENST00000456482 SUMO2P2-001 processed_pseudogene Homo_sapiens 3e-17 92
ENST00000504193 SUMO2P4-002 processed_pseudogene Homo_sapiens 0 339
ENST00000504438 SUMO2P17-001 transcribed_processed_pseudogene Homo_sapiens 0 387
ENST00000505273 SUMO2P6-001 processed_pseudogene Homo_sapiens 0 394
ENST00000506790 SUMO2P5-001 processed_pseudogene Homo_sapiens 1.4013e-45 185
ENST00000508743 SUMO2P17-002 processed_transcript Homo_sapiens 1.96182e-44 183
ENST00000511179 SUMO2P7-001 processed_pseudogene Homo_sapiens 0 350
ENST00000520803 SUMO2P20-001 processed_pseudogene Homo_sapiens 0 346
ENST00000536192 RP1-241P17.4-001 processed_pseudogene Homo_sapiens 0 444
ENST00000572284 RP3-509I19.6-002 processed_transcript Homo_sapiens 0 255
ENST00000578238 SUMO2-003 protein_coding Homo_sapiens 0 424
ENST00000588843 RP11-49K24.5-001 processed_pseudogene Homo_sapiens 0 337

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