C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: coiled-coil domain containing 47
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000403162 CCDC47-002 ENSG00000108588 9606 - 17:63746403-63773570 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartMuscleENST00000403162
Transcript ID Heart Muscle
ENST00000403162 11.795±0.00 19.637±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B9 CIL_0009B9_0001 VISTA 17:63374232-63977730
CIL_0006Q3 CIL_0006Q3_0001 CGP 17:63745250-63819317

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001649 IDA osteoblast differentiation
GO:0005515 IPI protein binding
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000002043 Ccdc47-001 protein_coding Mus_musculus 0 2198
ENSMUST00000121523 Gm12097-001 processed_pseudogene Mus_musculus 0 1668
ENSMUST00000125383 Ccdc47-005 protein_coding Mus_musculus 0 869
ENSMUST00000106865 Ccdc47-003 protein_coding Mus_musculus 0 725
ENSMUST00000137915 Ccdc47-004 protein_coding Mus_musculus 0 466

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