C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: coiled-coil domain containing 47
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000137915 Ccdc47-004 ENSMUSG00000078622 10090 - 11:106202005-106202905 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000137915
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000137915 123.478±0.00 177.642±0.00 154.794±41.76 142.212±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B9 CIL_0009B9_0002 VISTA 11:105834084-106435839
CIL_0006Q3 CIL_0006Q3_0002 CGP 11:106197408-106249139

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IDA calcium ion binding
GO:0005783 IDA endoplasmic reticulum
GO:0006983 IMP ER overload response
GO:0009791 IMP post-embryonic development
GO:0055074 IMP calcium ion homeostasis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000225726 CCDC47-001 protein_coding Homo_sapiens 0 466
ENST00000403162 CCDC47-002 protein_coding Homo_sapiens 0 466
ENST00000582252 CCDC47-003 protein_coding Homo_sapiens 0 468
ENST00000612558 CCDC47-201 protein_coding Homo_sapiens 0 466

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