C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0006Q3_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000108588-ENSG00000198231 | CGP | 9606 | 17:63745250-63819317  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000108588  (CCDC47)coiled-coil domain containing 47 |
ENST00000225726 (CCDC47-001)
|
63745250-63773775 | protein_coding | |
|
ENST00000403162 (CCDC47-002)
|
63746403-63773570 | protein_coding | ||
|
ENST00000580986 (CCDC47-005)
|
63766119-63776351 | protein_coding | ||
|
ENST00000582252 (CCDC47-003)
|
63751770-63773570 | protein_coding | ||
|
ENST00000582331 (CCDC47-006)
|
63752780-63761537 | retained_intron | ||
|
ENST00000584112 (CCDC47-007)
|
63765760-63773564 | retained_intron | ||
|
ENST00000612558 (CCDC47-201)
|
63746427-63764793 | protein_coding | ||
|
ENSG00000198231 (DDX42) DEAD (Asp-Glu-Ala-Asp) box helicase 42 |
ENST00000359353 (DDX42-010)
|
63774190-63818398 | protein_coding | |
|
ENST00000389924 (DDX42-201)
|
63774189-63819316 | protein_coding | ||
|
ENST00000457800 (DDX42-202)
|
63792531-63819246 | protein_coding | ||
|
ENST00000577940 (DDX42-006)
|
63792529-63813290 | nonsense_mediated_decay | ||
|
ENST00000577978 (DDX42-015)
|
63800177-63806542 | retained_intron | ||
|
ENST00000578137 (DDX42-012)
|
63787038-63805287 | nonsense_mediated_decay | ||
|
ENST00000578593 (DDX42-005)
|
63811281-63819247 | retained_intron | ||
|
ENST00000578681 (DDX42-001)
|
63773863-63819317 | protein_coding | ||
|
ENST00000579511 (DDX42-014)
|
63800151-63806556 | retained_intron | ||
|
ENST00000579539 (DDX42-017)
|
63816589-63817886 | retained_intron | ||
|
ENST00000580108 (DDX42-011)
|
63787036-63798196 | retained_intron | ||
|
ENST00000581135 (DDX42-009)
|
63773603-63792504 | protein_coding | ||
|
ENST00000581477 (DDX42-004)
|
63810263-63811271 | retained_intron | ||
|
ENST00000581767 (DDX42-008)
|
63817073-63819316 | retained_intron | ||
|
ENST00000582985 (DDX42-018)
|
63816968-63819099 | processed_transcript | ||
|
ENST00000583590 (DDX42-002)
|
63773884-63819317 | protein_coding | ||
|
ENST00000584010 (DDX42-003)
|
63805508-63819209 | retained_intron | ||
|
ENST00000584261 (DDX42-013)
|
63792486-63806650 | nonsense_mediated_decay | ||
|
ENST00000584951 (DDX42-016)
|
63813272-63815970 | retained_intron | ||
| CIL_0006Q3_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000078622-ENSMUSG00000020705 | CGP | 10090 | 11:106197408-106249139 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000020705 (Ddx42) DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 |
ENSMUST00000021046 (Ddx42-001)
|
106216926-106249139 | protein_coding | |
|
ENSMUST00000152860 (Ddx42-002)
|
106236996-106238824 | processed_transcript | ||
|
ENSMUSG00000069631 (Strada) STE20-related kinase adaptor alpha |
ENSMUST00000007444 (Strada-002)
|
106163351-106193536 | protein_coding | |
|
ENSMUST00000103072 (Strada-001)
|
106163848-106193562 | protein_coding | ||
|
ENSMUST00000106867 (Strada-003)
|
106183902-106193572 | protein_coding | ||
|
ENSMUST00000122989 (Strada-004)
|
106163330-106202168 | processed_transcript | ||
|
ENSMUST00000152008 (Strada-005)
|
106168475-106193539 | protein_coding | ||
|
ENSMUSG00000078622 (Ccdc47) coiled-coil domain containing 47 |
ENSMUST00000002043 (Ccdc47-001)
|
106197408-106216344 | protein_coding | |
|
ENSMUST00000106865 (Ccdc47-003)
|
106200779-106204428 | protein_coding | ||
|
ENSMUST00000125383 (Ccdc47-005)
|
106201618-106205435 | protein_coding | ||
|
ENSMUST00000137915 (Ccdc47-004)
|
106202005-106202905 | protein_coding | ||
|
ENSMUST00000153982 (Ccdc47-002)
|
106204293-106205542 | processed_transcript | ||
Expression Patterns
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