C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peptidylprolyl isomerase A (cyclophilin A) pseudogene 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000403866 PPIAP9-001 ENSG00000219797 9606 - 6:31519480-31520291 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000403866
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000403866 0.613±0.00 0.918±0.00 0.325±0.00 0.279±0.00 0.309±0.00 0.108±0.00 0.820±0.00 0.324±0.00 0.339±0.00 0.079±0.00 0.098±0.00 0.335±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000175860 Gm6061-001 processed_pseudogene Mus_musculus 0 638
ENSMUST00000075723 Gm10123-001 processed_pseudogene Mus_musculus 0 632
ENSMUST00000132846 Ppia-001 protein_coding Mus_musculus 0 632
ENSMUST00000120318 Gm13493-001 processed_pseudogene Mus_musculus 0 619
ENSMUST00000090749 Ppia-005 processed_transcript Mus_musculus 0 608
ENSMUST00000077747 Gm9234-201 processed_pseudogene Mus_musculus 0 603
ENSMUST00000119389 Gm14046-001 processed_pseudogene Mus_musculus 0 599
ENSMUST00000178933 Gm5558-201 processed_pseudogene Mus_musculus 0 593
ENSMUST00000119740 Gm12728-001 translated_processed_pseudogene Mus_musculus 0 590
ENSMUST00000081336 Gm6065-201 processed_pseudogene Mus_musculus 0 580
ENSMUST00000075293 E030024N20Rik-001 processed_pseudogene Mus_musculus 0 579
ENSMUST00000099961 Gm6043-201 processed_pseudogene Mus_musculus 0 577
ENSMUST00000155824 Ppia-003 retained_intron Mus_musculus 0 569
ENSMUST00000120735 Gm5883-001 processed_pseudogene Mus_musculus 0 531
ENSMUST00000119751 Gm11469-001 processed_pseudogene Mus_musculus 0 525
ENSMUST00000137829 Ppia-002 retained_intron Mus_musculus 0 525
ENSMUST00000117621 Gm13750-001 processed_pseudogene Mus_musculus 0 518
ENSMUST00000177265 Gm5777-001 processed_pseudogene Mus_musculus 0 516
ENSMUST00000118678 Gm13679-001 processed_pseudogene Mus_musculus 0 497
ENSMUST00000121819 Gm6044-001 processed_pseudogene Mus_musculus 0 492
ENSMUST00000172723 Gm5967-001 processed_pseudogene Mus_musculus 0 484
ENSMUST00000186816 RP23-215C21.3-001 processed_pseudogene Mus_musculus 0 453
ENSMUST00000119162 Gm15621-001 processed_pseudogene Mus_musculus 0 424
ENSMUST00000117298 Gm12842-001 processed_pseudogene Mus_musculus 0 390
ENSMUST00000069552 Gm5160-201 protein_coding Mus_musculus 0 326
ENSMUST00000137540 Gclm-003 processed_transcript Mus_musculus 0 313
ENSMUST00000121648 Gm6067-001 processed_pseudogene Mus_musculus 0 309
ENSMUST00000135789 Ppia-004 retained_intron Mus_musculus 0 235
ENSMUST00000188400 RP23-325F17.1-001 processed_pseudogene Mus_musculus 3e-30 135

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