C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: structural maintenance of chromosomes 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000404354 SMC1B-002 ENSG00000077935 9606 - 22:45344458-45413619 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartPlacentaTestisENST00000404354
Transcript ID Brain Heart Placenta Testis
ENST00000404354 0.028±0.00 0.008±0.00 0.148±0.00 13.147±11.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00054D CIL_00054D_0001 CGP 22:45308968-45413619
CIL_00054C CIL_00054C_0001 CGP 22:45344063-45432496

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005694 IEA chromosome
GO:0016020 IEA membrane
GO:0016192 IEA vesicle-mediated transport
GO:0030893 IDA meiotic cohesin complex
GO:0051276 IEA chromosome organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023068 Smc1b-201 protein_coding Mus_musculus 0 3476

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