C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calpain 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000404753 CAPN10-005 ENSG00000142330 9606 + 2:240586739-240599104 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastHeartLiverMuscleTestisENST00000404753
Transcript ID Adipose Bladder Breast Heart Liver Muscle Testis
ENST00000404753 0.488±0.00 0.137±0.00 1.461±0.53 1.896±0.00 0.246±0.00 0.544±0.00 2.733±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AE CIL_0009AE_0001 VISTA 2:240068562-240673577
CIL_0003NU CIL_0003NU_0001 CGP 2:240565804-240617705
CIL_0003NA CIL_0003NA_0001 CGP 2:240586716-240631259

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004198 IEA calcium-dependent cysteine-type endopeptidase activity
GO:0005622 IEA intracellular
GO:0006508 IEA proteolysis
GO:0032869 IEA cellular response to insulin stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027488 Capn10-001 protein_coding Mus_musculus 0 1700
ENSMUST00000152983 Capn10-003 nonsense_mediated_decay Mus_musculus 0 1376

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