C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bromodomain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000404760 BRD1-003 ENSG00000100425 9606 - 22:49773283-49827512 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000404760
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000404760 1.286±0.00 5.174±0.00 0.923±0.00 0.779±0.42 0.679±0.24 3.172±0.07 0.720±0.00 1.412±0.89 0.558±0.00 1.524±0.11 0.853±0.00 6.128±3.83 2.834±1.67 35.261±25.70

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007IS CIL_0007IS_0001 CGP 22:49773283-49890078

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0008270 IEA zinc ion binding
GO:0042393 IDA histone binding
GO:0043966 IDA histone H3 acetylation
GO:0070776 IDA MOZ/MORF histone acetyltransferase complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109381 Brd1-001 protein_coding Mus_musculus 0 5387
ENSMUST00000088911 Brd1-003 protein_coding Mus_musculus 0 3013
ENSMUST00000109380 Brd1-002 protein_coding Mus_musculus 0 2992
ENSMUST00000156155 Brd1-004 processed_transcript Mus_musculus 0 569
ENSDART00000067828 BRPF1-201 protein_coding Danio_rerio 0 501
ENSDART00000125388 BRPF1-202 protein_coding Danio_rerio 0 448
ENSMUST00000139515 Brd1-006 processed_transcript Mus_musculus 0 351

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