C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000405921 RP1-290I10.2-001 ENSG00000216781 9606 - 6:10365593-10366582 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENST00000405921
Transcript ID Brain
ENST00000405921 0.021±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007NC CIL_0007NC_0001 UCNEbase 6:8153140-10408054
CIL_00097A CIL_00097A_0001 VISTA 6:10093642-10694839
CIL_00086X CIL_00086X_0001 VISTA 6:10107199-10709812

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000078286 Rpl7l1-201 protein_coding Mus_musculus 0 442
ENSMUST00000118660 Gm12099-001 processed_pseudogene Mus_musculus 0 405
ENSMUST00000079057 1700084J12Rik-001 transcribed_processed_pseudogene Mus_musculus 0 401
ENSMUST00000187707 1700084J12Rik-002 processed_transcript Mus_musculus 0 401
ENSMUST00000119005 Gm11222-001 processed_pseudogene Mus_musculus 0 390

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