C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: deoxyribonuclease I
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000407479 DNASE1-005 ENSG00000213918 9606 + 16:3642938-3665472 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonKidneyOvaryENST00000407479
Transcript ID Adrenal Colon Kidney Ovary
ENST00000407479 0.941±0.00 0.567±0.00 2.647±0.00 1.383±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000AY CIL_0000AY_0001 CGP 16:3581181-3680143
CIL_0000ON CIL_0000ON_0001 CGP 16:3611728-3717597

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000737 IEA DNA catabolic process, endonucleolytic
GO:0003779 IEA actin binding
GO:0004530 IEA deoxyribonuclease I activity
GO:0004536 IEA deoxyribonuclease activity
GO:0005515 IPI protein binding
GO:0005576 TAS extracellular region
GO:0005634 IEA nucleus
GO:0006308 IEA DNA catabolic process
GO:0006915 IEA apoptotic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000006137 Trap1-001 protein_coding Mus_musculus 7.00649e-43 182
ENSMUST00000137945 Trap1-004 processed_transcript Mus_musculus 1.99965e-42 180
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.000000002 71

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