C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000407767 RP3-406A7.3-001 ENSG00000220660 9606 + 6:136364129-136364462 transcribed_processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastTestisENST00000407767
Transcript ID Adrenal Breast Testis
ENST00000407767 0.054±0.00 0.111±0.00 0.901±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000879 CIL_000879_0001 VISTA 6:135802414-136405223

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000180255 Gm11942-001 processed_pseudogene Mus_musculus 0 200
ENSMUST00000008036 Rplp1-201 protein_coding Mus_musculus 0 195
ENSMUST00000073722 Gm10073-201 protein_coding Mus_musculus 0 189
ENSMUST00000177803 Gm13249-001 processed_pseudogene Mus_musculus 3e-33 145
ENSMUST00000117496 Gm13035-001 processed_pseudogene Mus_musculus 3e-33 145
ENSMUST00000118238 Gm13229-001 processed_pseudogene Mus_musculus 4e-32 141
ENSMUST00000122071 Gm13149-001 processed_pseudogene Mus_musculus 2e-31 139
ENSMUST00000119875 Gm13163-001 processed_pseudogene Mus_musculus 2e-30 135
ENSMUST00000118035 Gm13137-001 processed_pseudogene Mus_musculus 2e-30 135
ENSMUST00000189517 Gm5244-002 processed_transcript Mus_musculus 1e-27 126
ENSMUST00000119646 Gm13245-001 processed_pseudogene Mus_musculus 4e-27 124
ENSMUST00000120994 Gm13246-001 processed_pseudogene Mus_musculus 4e-27 124
ENSMUST00000164001 Gm5244-001 transcribed_processed_pseudogene Mus_musculus 5e-26 121

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