C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13246
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120994 Gm13246-001 ENSMUSG00000083235 10090 - 4:145844404-145844718 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000120994
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000120994 0.691±0.17 0.386±0.02 0.567±0.00 0.476±0.16 1.021±0.28 0.218±0.00 0.329±0.13 0.913±0.30 0.633±0.12 1.612±1.24 0.375±0.12 1.764±0.57

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000260379 RPLP1-001 protein_coding Homo_sapiens 0 320
ENST00000357790 RPLP1-002 protein_coding Homo_sapiens 8.40779e-45 183
ENST00000405359 AC016739.2-001 processed_pseudogene Homo_sapiens 0 320
ENST00000407767 RP3-406A7.3-001 transcribed_processed_pseudogene Homo_sapiens 4e-27 124
ENST00000423096 AC008753.3-001 processed_pseudogene Homo_sapiens 0.000000000001 77
ENST00000437248 RP11-435F13.2-001 processed_pseudogene Homo_sapiens 0 231
ENST00000487304 RPLP1-003 retained_intron Homo_sapiens 9.80909e-45 185
ENST00000488122 RPLP1-004 retained_intron Homo_sapiens 0 267
ENST00000490423 RP11-395C3.1-001 processed_pseudogene Homo_sapiens 1e-26 122
ENST00000560274 RPLP1-006 protein_coding Homo_sapiens 0.0000000000009 77

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