C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spermatid perinuclear RNA binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000407982 STRBP-002 ENSG00000165209 9606 - 9:123125220-123268564 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartKidneyLiverLungMuscleOvaryTestisENST00000407982
Transcript ID Brain Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000407982 3.049±0.00 1.460±0.00 1.288±0.00 2.732±0.00 1.030±0.00 0.905±0.16 1.173±0.00 1.057±0.08 12.879±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028279 Strbp-201 protein_coding Mus_musculus 0 2813
ENSMUST00000072186 Strbp-001 protein_coding Mus_musculus 0 2813
ENSMUST00000183690 Strbp-003 nonsense_mediated_decay Mus_musculus 0 2169
ENSMUST00000135488 Strbp-002 processed_transcript Mus_musculus 0 1092
ENSMUST00000145808 Strbp-006 protein_coding Mus_musculus 0 845
ENSMUST00000155237 Strbp-005 protein_coding Mus_musculus 0 701
ENSMUST00000144206 Strbp-004 processed_transcript Mus_musculus 3.00018e-42 178

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