C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000408001 RP3-375P9.2-001 ENSG00000217130 9606 + 6:34744176-34744673 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000408001
Transcript ID Adipose Adrenal Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000408001 0.147±0.00 0.475±0.00 0.210±0.00 0.267±0.00 0.073±0.00 0.209±0.14 0.156±0.00 0.138±0.00 0.141±0.06 0.212±0.09 0.114±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000258 CIL_000258_0001 CGP 6:34587288-34773794

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000178774 Rps10-201 protein_coding Mus_musculus 0 601
ENSMUST00000114881 Rps10-003 protein_coding Mus_musculus 0 601
ENSMUST00000114882 Rps10-001 protein_coding Mus_musculus 0 601
ENSMUST00000127484 Rps10-ps2-001 processed_pseudogene Mus_musculus 0 584
ENSMUST00000155071 Rps10-006 processed_transcript Mus_musculus 0 555
ENSMUST00000122317 Rps10-ps3-001 processed_pseudogene Mus_musculus 0 492
ENSMUST00000145226 Rps10-004 retained_intron Mus_musculus 0 492
ENSMUST00000025052 Rps10-002 protein_coding Mus_musculus 0 492
ENSMUST00000120308 Rps10-ps4-001 processed_pseudogene Mus_musculus 0 438
ENSMUST00000152982 Rps10-007 processed_transcript Mus_musculus 0 346

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