C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TNF receptor-associated factor 3 interacting protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409739 TRAF3IP1-003 ENSG00000204104 9606 + 2:238320536-238329342 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLungOvaryPlacentaTestisENST00000409739
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Lung Ovary Placenta Testis
ENST00000409739 5.664±0.00 3.922±0.00 0.829±0.00 11.859±0.00 3.587±3.05 3.376±2.94 2.463±0.00 5.825±0.00 8.415±0.00 1.126±0.00 15.898±5.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003NE CIL_0003NE_0001 CGP 2:238244038-238400900
CIL_0004UF CIL_0004UF_0002 CGP 2:238320441-238452250

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008017 IEA microtubule binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000047242 Traf3ip1-001 protein_coding Mus_musculus 5.60519e-45 185
ENSMUST00000189341 Traf3ip1-003 protein_coding Mus_musculus 5.60519e-45 185

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