C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 237
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409883 TMEM237-001 ENSG00000155755 9606 - 2:201620184-201643517 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000409883
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000409883 0.722±0.00 1.814±0.00 0.935±0.00 0.472±0.16 0.627±0.00 0.675±0.00 0.125±0.00 0.500±0.00 1.026±0.00 1.816±0.87 0.340±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089O CIL_00089O_0001 VISTA 2:201132231-201734391
CIL_00020P CIL_00020P_0001 CGP 2:201487425-201643570
CIL_0009CR CIL_0009CR_0001 VISTA 2:201587932-202188948
CIL_00020O CIL_00020O_0001 CGP 2:201620184-201698694

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0030111 IMP regulation of Wnt signaling pathway
GO:0035869 IDA ciliary transition zone
GO:0042384 IMP cilium assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000087475 Tmem237-003 protein_coding Mus_musculus 0 1131
ENSMUST00000094917 Tmem237-001 protein_coding Mus_musculus 0 1131
ENSMUST00000186794 Tmem237-002 protein_coding Mus_musculus 0 1105
ENSMUST00000190014 Tmem237-004 protein_coding Mus_musculus 0 592
ENSMUST00000185951 Tmem237-006 retained_intron Mus_musculus 0 322
ENSMUST00000138679 Gm4735-001 processed_pseudogene Mus_musculus 2e-32 147
ENSMUST00000080926 Eno1-001 protein_coding Mus_musculus 2e-32 147
ENSMUST00000076155 Eno1b-201 protein_coding Mus_musculus 2e-32 147
ENSMUST00000150175 Eno1-004 protein_coding Mus_musculus 3e-20 106
ENSMUST00000130632 Eno1-003 retained_intron Mus_musculus 0.000000000002 81

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