C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear receptor corepressor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000411510 NCOR1-009 ENSG00000141027 9606 - 17:16126082-16215537 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENST00000411510
Transcript ID Placenta
ENST00000411510 15.206±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000H6 CIL_0000H6_0001 CGP 17:15976560-16045015
CIL_0000NU CIL_0000NU_0001 CGP 17:15999380-16218185
CIL_0006JO CIL_0006JO_0002 CGP 17:16029157-16351797

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005634 IEA nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000018645 Ncor1-001 protein_coding Mus_musculus 0 2462
ENSMUST00000127471 Ncor1-009 protein_coding Mus_musculus 0 2370
ENSMUST00000101066 Ncor1-202 protein_coding Mus_musculus 0 2357
ENSMUST00000101067 Ncor1-004 protein_coding Mus_musculus 0 2326
ENSMUST00000155486 Ncor1-007 protein_coding Mus_musculus 0 2148
ENSMUST00000101068 Ncor1-008 retained_intron Mus_musculus 0 1788
ENSMUST00000069456 Ncor1-010 protein_coding Mus_musculus 0 1262
ENSMUST00000141447 Ncor1-012 protein_coding Mus_musculus 0 630
ENSMUST00000159069 Ncor1-002 protein_coding Mus_musculus 0 610
ENSMUST00000151498 Ncor1-019 protein_coding Mus_musculus 0 610
ENSMUST00000117345 Gm6743-001 processed_pseudogene Mus_musculus 0 577
ENSMUST00000124027 Ncor1-011 retained_intron Mus_musculus 0 484
ENSMUST00000160171 Ncor1-014 retained_intron Mus_musculus 0 337

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