C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 4 gamma, 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000411531 EIF4G1-038 ENSG00000114867 9606 + 3:184316192-184334908 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000411531
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000411531 3.516±0.00 4.346±0.00 8.078±0.00 8.228±0.00 13.676±9.21 9.285±2.29 9.662±1.83 10.510±5.17 44.761±37.99 19.814±0.00 13.700±2.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005G3 CIL_0005G3_0001 CGP 3:184135038-184684758
CIL_000572 CIL_000572_0001 CGP 3:184298709-184335358
CIL_00056Z CIL_00056Z_0001 CGP 3:184314495-184346275

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0005488 IEA binding
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115461 Eif4g1-004 protein_coding Mus_musculus 0 5507
ENSMUST00000073840 Eif4g1-201 protein_coding Mus_musculus 0 5487
ENSMUST00000115457 Eif4g1-003 protein_coding Mus_musculus 0 5487
ENSMUST00000115460 Eif4g1-011 protein_coding Mus_musculus 0 5443
ENSMUST00000044783 Eif4g1-001 protein_coding Mus_musculus 0 5443
ENSMUST00000115463 Eif4g1-002 protein_coding Mus_musculus 0 5380
ENSMUST00000132320 Eif4g1-006 retained_intron Mus_musculus 0 4894
ENSMUST00000143939 Eif4g1-007 processed_transcript Mus_musculus 0 4728
ENSMUST00000142344 Eif4g1-010 protein_coding Mus_musculus 0 3350
ENSMUST00000150333 Eif4g1-008 processed_transcript Mus_musculus 0 3005
ENSMUST00000128594 Eif4g1-009 processed_transcript Mus_musculus 0 2844
ENSMUST00000156226 Eif4g1-005 nonsense_mediated_decay Mus_musculus 0 1264
ENSMUST00000128840 Eif4g1-020 processed_transcript Mus_musculus 0 773
ENSMUST00000151679 Eif4g1-014 protein_coding Mus_musculus 0 765
ENSMUST00000154594 Eif4g1-021 processed_transcript Mus_musculus 0 736
ENSMUST00000136713 Eif4g1-018 processed_transcript Mus_musculus 0 702
ENSMUST00000136106 Eif4g1-015 processed_transcript Mus_musculus 0 654
ENSMUST00000154950 Eif4g1-012 protein_coding Mus_musculus 0 575
ENSMUST00000140576 Eif4g1-019 protein_coding Mus_musculus 0 545
ENSMUST00000141034 Eif4g1-013 protein_coding Mus_musculus 0 368
ENSMUST00000129958 Eif4g1-017 retained_intron Mus_musculus 0 276
ENSMUST00000137690 Eif4g1-016 retained_intron Mus_musculus 0 209

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