C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00056Z_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000114867-ENSG00000175182 CGP 9606 3:184314495-184346275
GeneTranscriptPositionBiotype
ENSG00000114859 (CLCN2)
chloride channel, voltage-sensitive 2 		ENST00000265593 (CLCN2-001) 184346185-184361651 protein_coding
ENST00000344937 (CLCN2-004) 184346188-184361602 protein_coding
ENST00000430397 (CLCN2-006) 184346221-184357020 nonsense_mediated_decay
ENST00000434054 (CLCN2-003) 184346398-184361603 protein_coding
ENST00000457512 (CLCN2-002) 184346520-184361603 protein_coding
ENST00000465231 (CLCN2-009) 184357972-184358658 retained_intron
ENST00000475279 (CLCN2-007) 184355403-184357029 processed_transcript
ENST00000485667 (CLCN2-005) 184355055-184361486 retained_intron
ENST00000491162 (CLCN2-008) 184352416-184353296 retained_intron
ENSG00000175182 (FAM131A)
family with sequence similarity 131, member A 		ENST00000310585 (FAM131A-002) 184340470-184346275 protein_coding
ENST00000340957 (FAM131A-001) 184335937-184346273 protein_coding
ENST00000383847 (FAM131A-005) 184337452-184345173 protein_coding
ENST00000418281 (FAM131A-003) 184335929-184346239 protein_coding
ENST00000418768 (FAM131A-007) 184337177-184344819 protein_coding
ENST00000433578 (FAM131A-009) 184335945-184342860 protein_coding
ENST00000450976 (FAM131A-006) 184335926-184345033 protein_coding
ENST00000453072 (FAM131A-008) 184338829-184344986 protein_coding
ENST00000487702 (FAM131A-010) 184342122-184343139 processed_transcript
ENST00000497070 (FAM131A-004) 184337565-184341460 processed_transcript
ENSG00000212158 (SNORD66)
small nucleolar RNA, C/D box 66 		ENST00000390856 (SNORD66-201) 184325696-184325771 snoRNA

Homo sapiens Ensembl (GRCh38)

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CIL_00056Z_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000045983-ENSMUSG00000050821 CGP 10090 16:20668313-20703048
GeneTranscriptPositionBiotype
ENSMUSG00000022843 (Clcn2)
chloride channel 2 		ENSMUST00000007207 (Clcn2-001) 20702964-20716117 protein_coding
ENSMUST00000120099 (Clcn2-005) 20703223-20716111 protein_coding
ENSMUST00000123417 (Clcn2-009) 20707706-20708734 retained_intron
ENSMUST00000131522 (Clcn2-002) 20705538-20717746 nonsense_mediated_decay
ENSMUST00000131833 (Clcn2-007) 20710091-20711965 retained_intron
ENSMUST00000132512 (Clcn2-006) 20712311-20713668 retained_intron
ENSMUST00000144400 (Clcn2-008) 20707174-20709126 retained_intron
ENSMUST00000148131 (Clcn2-003) 20702988-20716114 retained_intron
ENSMUST00000153075 (Clcn2-004) 20702998-20716164 retained_intron
ENSMUSG00000045983 (Eif4g1)
eukaryotic translation initiation factor 4, gamma 1 		ENSMUST00000044783 (Eif4g1-001) 20672723-20692884 protein_coding
ENSMUST00000073840 (Eif4g1-201) 20672749-20692881 protein_coding
ENSMUST00000115457 (Eif4g1-003) 20672823-20692884 protein_coding
ENSMUST00000115460 (Eif4g1-011) 20673517-20692881 protein_coding
ENSMUST00000115461 (Eif4g1-004) 20673420-20692883 protein_coding
ENSMUST00000115463 (Eif4g1-002) 20672746-20692883 protein_coding
ENSMUST00000128594 (Eif4g1-009) 20672770-20683842 processed_transcript
ENSMUST00000128840 (Eif4g1-020) 20668315-20678925 processed_transcript
ENSMUST00000129958 (Eif4g1-017) 20688978-20689664 retained_intron
ENSMUST00000132320 (Eif4g1-006) 20678276-20692881 retained_intron
ENSMUST00000136106 (Eif4g1-015) 20678406-20679585 processed_transcript
ENSMUST00000136713 (Eif4g1-018) 20673439-20678663 processed_transcript
ENSMUST00000137690 (Eif4g1-016) 20681039-20681733 retained_intron
ENSMUST00000140576 (Eif4g1-019) 20672823-20679271 protein_coding
ENSMUST00000141034 (Eif4g1-013) 20673814-20678659 protein_coding
ENSMUST00000142344 (Eif4g1-010) 20672749-20683836 protein_coding
ENSMUST00000143939 (Eif4g1-007) 20672755-20692883 processed_transcript
ENSMUST00000150333 (Eif4g1-008) 20672771-20683842 processed_transcript
ENSMUST00000151679 (Eif4g1-014) 20674111-20678674 protein_coding
ENSMUST00000154594 (Eif4g1-021) 20668313-20679395 processed_transcript
ENSMUST00000154950 (Eif4g1-012) 20673398-20677798 protein_coding
ENSMUST00000156226 (Eif4g1-005) 20673295-20692884 nonsense_mediated_decay
ENSMUSG00000050821 (Fam131a)
family with sequence similarity 131, member A 		ENSMUST00000056518 (Fam131a-001) 20694908-20703048 protein_coding
ENSMUST00000118919 (Fam131a-002) 20693283-20703044 protein_coding
ENSMUST00000128273 (Fam131a-003) 20696175-20701659 protein_coding
ENSMUST00000149543 (Fam131a-004) 20693282-20699283 protein_coding
ENSMUSG00000077239 (Snord66)
small nucleolar RNA, C/D box 66 		ENSMUST00000104051 (Snord66-201) 20684239-20684313 snoRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00056Z_0001ENSG00000114859ENST00000265593ENST00000344937ENST00000430397ENST00000434054ENST00000457512ENST00000465231ENST00000475279ENST00000485667ENST00000491162ENSG00000175182ENST00000310585ENST00000340957ENST00000383847ENST00000418281ENST00000418768ENST00000433578ENST00000450976ENST00000453072ENST00000487702ENST00000497070ENSG00000212158ENST00000390856CIL_00056Z_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00056Z_0001ENSG00000114859ENST00000265593ENST00000344937ENST00000430397ENST00000434054ENST00000457512ENSG00000175182ENST00000310585ENST00000340957ENST00000418281ENST00000418768ENST00000450976ENST00000453072ENST00000497070ENSG00000212158ENST00000390856CIL_00056Z_0002ENSMUSG00000022843ENSMUST00000007207ENSMUST00000144400ENSMUST00000148131ENSMUST00000153075ENSMUSG00000045983ENSMUST00000044783ENSMUST00000073840ENSMUST00000115457ENSMUST00000115461ENSMUST00000128594ENSMUST00000132320ENSMUST00000136106ENSMUST00000142344ENSMUST00000156226ENSMUSG00000050821ENSMUST00000056518ENSMUST00000118919ENSMUST00000128273ENSMUSG00000077239ENSMUST00000104051
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000114859 ENST00000265593 N/A N/A N/A N/A N/A N/A N/A 1.697±0.00 N/A N/A N/A 2.937±1.12 1.015±0.00 N/A
ENST00000344937 N/A N/A 0.265±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.854±0.00
ENST00000430397 N/A N/A N/A N/A N/A N/A N/A 0.124±0.00 N/A N/A N/A N/A N/A N/A
ENST00000434054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.658±0.00 1.483±0.00 9.468±5.46
ENST00000457512 N/A 0.988±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465231 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475279 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485667 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000175182 ENST00000310585 N/A N/A 0.576±0.00 4.165±0.00 0.333±0.00 N/A N/A N/A N/A 0.168±0.00 0.383±0.00 1.979±0.72 N/A N/A
ENST00000340957 2.542±0.00 N/A N/A 8.512±4.89 1.720±0.00 3.651±0.00 4.074±0.00 1.992±0.00 N/A 9.973±0.00 N/A 6.343±1.05 2.488±0.60 7.796±0.00
ENST00000383847 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000418281 2.220±0.00 2.657±0.00 N/A N/A 3.375±0.00 6.019±0.00 N/A 4.585±0.00 0.442±0.00 10.245±0.00 N/A 10.620±0.00 4.909±0.00 9.374±2.37
ENST00000418768 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.372±0.00 N/A N/A N/A N/A
ENST00000433578 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450976 3.143±0.00 N/A N/A 20.094±0.00 N/A N/A 4.638±0.00 N/A N/A N/A 2.035±0.00 N/A N/A N/A
ENST00000453072 N/A N/A N/A N/A N/A 5.936±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487702 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497070 N/A 0.609±0.00 0.314±0.00 1.237±0.00 0.491±0.00 N/A 0.290±0.00 0.306±0.00 0.735±0.49 0.104±0.00 N/A 0.765±0.00 N/A N/A
ENSG00000212158 ENST00000390856 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.213±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022843 ENSMUST00000007207 2.335±1.44 56.273±4.66 N/A 11.321±0.91 2.093±0.15 72.776±7.27 2.077±0.00 6.489±1.16 12.504±7.74 1.635±0.19 N/A 8.967±3.45 2.902±0.88 8.741±0.70
ENSMUST00000120099 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123417 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131522 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132512 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144400 N/A N/A N/A N/A 7.755±0.00 N/A N/A N/A N/A N/A N/A 19.582±2.89 N/A N/A
ENSMUST00000148131 2.678±0.00 N/A N/A 4.210±0.00 N/A N/A N/A N/A N/A N/A N/A 5.933±1.50 N/A N/A
ENSMUST00000153075 5.017±3.07 32.112±6.39 3.372±0.16 9.027±0.28 2.978±0.94 36.666±8.32 N/A 3.193±1.42 5.291±1.44 1.529±0.24 N/A 12.612±4.62 2.533±0.92 15.521±1.18
ENSMUSG00000045983 ENSMUST00000044783 N/A N/A N/A 36.847±9.75 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000073840 59.615±1.23 24.199±2.98 N/A 14.927±6.12 41.297±5.53 38.388±6.70 24.461±3.89 29.797±3.53 39.837±11.41 36.679±6.46 35.822±8.85 47.267±13.63 52.973±36.83 17.877±4.63
ENSMUST00000115457 N/A N/A N/A N/A N/A N/A N/A N/A 12.576±0.00 N/A N/A 32.934±0.00 N/A N/A
ENSMUST00000115460 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000115461 27.566±1.15 19.829±4.84 17.013±1.49 15.881±4.94 23.986±3.35 27.848±4.17 15.503±4.51 15.627±5.40 21.242±9.95 17.153±2.04 41.251±5.65 30.119±5.76 27.216±10.67 N/A
ENSMUST00000115463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128594 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 37.960±0.00 83.821±27.75 26.692±0.00
ENSMUST00000128840 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129958 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132320 N/A N/A N/A 13.586±0.56 N/A N/A N/A N/A N/A N/A N/A N/A 23.154±0.00 49.853±20.29
ENSMUST00000136106 N/A N/A N/A N/A 139.690±2.03 152.942±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136713 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137690 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140576 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141034 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142344 N/A 21.622±3.54 N/A N/A 25.300±0.35 20.162±2.16 14.515±0.00 N/A 21.802±1.83 19.680±1.96 N/A N/A N/A N/A
ENSMUST00000143939 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151679 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154594 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154950 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156226 N/A N/A N/A 65.182±0.00 22.781±0.00 N/A N/A N/A N/A N/A N/A 79.398±0.00 143.458±54.31 32.951±0.00
ENSMUSG00000050821 ENSMUST00000056518 3.795±2.00 N/A 7.382±0.00 19.172±12.30 2.070±0.63 N/A 8.847±0.66 N/A N/A N/A 24.709±5.91 N/A 2.854±0.91 16.948±1.75
ENSMUST00000118919 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.870±0.00 N/A
ENSMUST00000128273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 49.191±7.60
ENSMUST00000149543 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000077239 ENSMUST00000104051 N/A N/A N/A N/A 23945.801±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

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