C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin associated protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000412543 UBAP2-005 ENSG00000137073 9606 - 9:33944515-34048949 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartKidneyLungOvaryPlacentaTestisENST00000412543
Transcript ID Bladder Brain Breast Heart Kidney Lung Ovary Placenta Testis
ENST00000412543 1.580±0.00 2.125±0.00 3.198±0.00 1.826±0.00 2.038±0.00 3.182±0.00 4.744±2.67 12.097±0.00 38.293±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006AS CIL_0006AS_0001 CGP 9:33817567-34048949
CIL_0006B3 CIL_0006B3_0001 CGP 9:33921693-34127399

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030143 Ubap2-201 protein_coding Mus_musculus 0 695
ENSMUST00000108068 Ubap2-001 protein_coding Mus_musculus 0 695
ENSMUST00000135323 Ubap2-006 protein_coding Mus_musculus 0 494
ENSMUST00000132499 Ubap2-003 processed_transcript Mus_musculus 0 486
ENSMUST00000134782 Ubap2-002 protein_coding Mus_musculus 0 486
ENSDART00000084241 UBAP2 (1 of 2)-201 protein_coding Danio_rerio 7e-26 122
ENSDART00000136234 UBAP2 (1 of 2)-001 protein_coding Danio_rerio 7e-26 122
ENSDART00000137104 UBAP2 (1 of 2)-002 protein_coding Danio_rerio 2e-16 92
ENSMUST00000140662 Ubap2-007 processed_transcript Mus_musculus 0.0000000009 69

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