C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: prohibitin pseudogene 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000412562 PHBP3-001 ENSG00000228121 9606 + 1:58999676-59000494 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLungTestisENST00000412562
Transcript ID Adrenal Breast Colon Kidney Lung Testis
ENST00000412562 0.045±0.00 0.024±0.00 0.064±0.00 0.046±0.00 0.022±0.00 0.033±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Y5 CIL_0008Y5_0001 VISTA 1:58756653-59358420
CIL_0007ZB CIL_0007ZB_0001 VISTA 1:58756772-59358111
CIL_0001N7 CIL_0001N7_0001 CGP 1:58780788-59767675

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000125172 Phb-001 protein_coding Mus_musculus 0 953
ENSMUST00000146631 Gm7666-001 transcribed_processed_pseudogene Mus_musculus 0 948
ENSMUST00000117522 1700071K01Rik-001 processed_pseudogene Mus_musculus 0 904
ENSMUST00000117258 Gm7781-001 processed_pseudogene Mus_musculus 0 749
ENSMUST00000036374 Phb-002 protein_coding Mus_musculus 0 691
ENSMUST00000122108 Gm7841-001 processed_pseudogene Mus_musculus 0 638
ENSMUST00000122042 Gm4996-001 processed_pseudogene Mus_musculus 0 610
ENSMUST00000119416 Gm14834-001 processed_pseudogene Mus_musculus 0 357
ENSMUST00000123001 Phb-005 processed_transcript Mus_musculus 0 353
ENSMUST00000162154 Fyb-006 processed_transcript Mus_musculus 0 311

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