C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000413412 RP4-730K3.3-001 ENSG00000232450 9606 - 1:113698884-113699631 transcribed_processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000413412
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000413412 0.555±0.00 0.318±0.00 0.751±0.00 0.391±0.13 0.142±0.01 0.472±0.00 0.346±0.01 0.519±0.00 0.106±0.00 0.944±0.00 0.600±0.00 0.395±0.05 0.235±0.08 0.419±0.06

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121348 Gm7638-001 processed_pseudogene Mus_musculus 0 267
ENSMUST00000187136 RP23-258M15.4-001 processed_pseudogene Mus_musculus 1.96182e-44 183
ENSMUST00000118606 Gm3943-001 processed_pseudogene Mus_musculus 2e-33 147
ENSMUST00000119247 Gm15653-001 processed_pseudogene Mus_musculus 1e-20 104
ENSMUST00000119396 Gm12959-001 processed_pseudogene Mus_musculus 6e-19 99
ENSDART00000110842 rps2-201 protein_coding Danio_rerio 0.0000000001 71
ENSDART00000133878 rps2-003 retained_intron Danio_rerio 0.0000000001 71
ENSDART00000138107 rps2-001 protein_coding Danio_rerio 0.0000000001 71
ENSDART00000141100 rps2-002 protein_coding Danio_rerio 0.0000000001 71

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