C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15653
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119247 Gm15653-001 ENSMUSG00000082039 10090 - 5:73476444-73477353 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverPlacentaTestisENSMUST00000119247
Transcript ID Brain Liver Placenta Testis
ENSMUST00000119247 0.045±0.00 0.494±0.40 0.037±0.02 6.600±2.99

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001MT CIL_0001MT_0002 CGP 5:73406076-73560794

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000110842 rps2-201 protein_coding Danio_rerio 0 523
ENSDART00000138107 rps2-001 protein_coding Danio_rerio 0 523
ENSDART00000141100 rps2-002 protein_coding Danio_rerio 8.99634e-43 178
ENSDART00000133878 rps2-003 retained_intron Danio_rerio 6e-25 119
ENST00000343262 RPS2-001 protein_coding Homo_sapiens 0 702
ENST00000393351 RP5-1106E3.1-001 processed_pseudogene Homo_sapiens 0 608
ENST00000397318 RPS2P55-001 processed_pseudogene Homo_sapiens 0 686
ENST00000400984 RP11-122G18.7-001 processed_pseudogene Homo_sapiens 0 612
ENST00000402069 RP3-337H4.6-001 processed_pseudogene Homo_sapiens 0 725
ENST00000413412 RP4-730K3.3-001 transcribed_processed_pseudogene Homo_sapiens 1e-20 104
ENST00000423464 RP11-183G22.1-001 processed_pseudogene Homo_sapiens 0 612
ENST00000428058 CTD-2666L21.2-001 processed_pseudogene Homo_sapiens 0 630
ENST00000434010 RPS2P1-001 processed_pseudogene Homo_sapiens 0 597
ENST00000436136 RP11-16L9.1-001 processed_pseudogene Homo_sapiens 0 483
ENST00000443009 RP11-306I1.1-001 processed_pseudogene Homo_sapiens 0 527
ENST00000443417 RPS2P35-001 processed_pseudogene Homo_sapiens 0 632
ENST00000445918 RP11-388B24.4-001 processed_pseudogene Homo_sapiens 0 477
ENST00000447334 RPS2P7-001 processed_pseudogene Homo_sapiens 0 675
ENST00000447420 RP4-803A2.2-001 unprocessed_pseudogene Homo_sapiens 0 460
ENST00000447422 RP11-109P14.8-001 processed_pseudogene Homo_sapiens 0 424
ENST00000449856 AC022210.2-001 processed_pseudogene Homo_sapiens 0 702
ENST00000458332 RPS2P46-001 processed_pseudogene Homo_sapiens 0 688
ENST00000459634 RP11-192C21.1-001 processed_pseudogene Homo_sapiens 0 553
ENST00000468126 RP11-324J13.1-001 processed_pseudogene Homo_sapiens 0 579
ENST00000469884 RP11-6K23.1-001 processed_pseudogene Homo_sapiens 0 527
ENST00000475555 RP11-364L4.1-001 processed_pseudogene Homo_sapiens 0 671
ENST00000476944 RPS2P4-001 processed_pseudogene Homo_sapiens 0 689
ENST00000479476 RPS2P6-001 processed_pseudogene Homo_sapiens 0 569
ENST00000480705 RP11-296A18.5-001 processed_pseudogene Homo_sapiens 0 691
ENST00000488803 RPS2P5-001 processed_pseudogene Homo_sapiens 0 699
ENST00000488906 RP5-867C24.1-001 processed_pseudogene Homo_sapiens 0 562
ENST00000491725 RP11-810P12.1-001 processed_pseudogene Homo_sapiens 0 518
ENST00000492365 KB-1683C8.1-001 processed_pseudogene Homo_sapiens 0 571
ENST00000494084 CTD-2013N17.1-001 processed_pseudogene Homo_sapiens 0 628
ENST00000494359 RP11-452G18.2-001 processed_pseudogene Homo_sapiens 0 652
ENST00000526522 RPS2-006 protein_coding Homo_sapiens 0 246
ENST00000526908 RPS2-010 retained_intron Homo_sapiens 0 385
ENST00000527109 RPS2-005 retained_intron Homo_sapiens 0 246
ENST00000527302 RPS2-007 protein_coding Homo_sapiens 0 503
ENST00000527826 RPS2-009 retained_intron Homo_sapiens 0 211
ENST00000527871 RPS2-004 retained_intron Homo_sapiens 0 246
ENST00000530225 RPS2-017 protein_coding Homo_sapiens 0 416
ENST00000531065 RPS2-003 retained_intron Homo_sapiens 1e-34 152
ENST00000532746 RPS2-012 nonsense_mediated_decay Homo_sapiens 7e-24 115
ENST00000533161 RPS2-002 retained_intron Homo_sapiens 0 420
ENST00000533186 RPS2-013 protein_coding Homo_sapiens 2e-23 113
ENST00000533872 RPS2-011 retained_intron Homo_sapiens 0 246
ENST00000534461 RPS2-014 retained_intron Homo_sapiens 0 383
ENST00000563194 RPS2-018 protein_coding Homo_sapiens 4e-34 147
ENST00000610837 RP11-19G24.1-001 processed_pseudogene Homo_sapiens 0 484
ENST00000612648 CTB-75G16.1-001 processed_pseudogene Homo_sapiens 0 599

Loading