| Transcript ID | Breast | Placenta |
|---|---|---|
| ENST00000413781 | 0.319±0.00 | 0.047±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | solute carrier family 6 (proline IMINO transporter), member 20 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000413781  |
SLC6A20-007 |
ENSG00000163817 |
9606 | - |
3:45771217-45796535  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00073G | CIL_00073G_0001 | CGP | 3:45689056-45796535 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005328 | IEA | neurotransmitter:sodium symporter activity |
| GO:0005887 | IEA | integral component of plasma membrane |
| GO:0006836 | IEA | neurotransmitter transport |
| GO:0016021 | IEA | integral component of membrane |
| GO:0055085 | IEA | transmembrane transport |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000170591
|
Slc6a20a-003 | protein_coding | Mus_musculus | 0 | 891 |
|
ENSMUST00000040960
|
Slc6a20a-001 | protein_coding | Mus_musculus | 0 | 830 |
|
ENSMUST00000168824
|
Slc6a20b-003 | nonsense_mediated_decay | Mus_musculus | 0 | 741 |
|
ENSMUST00000171122
|
Slc6a20b-004 | processed_transcript | Mus_musculus | 0 | 741 |
|
ENSMUST00000026273
|
Slc6a20b-001 | protein_coding | Mus_musculus | 0 | 741 |
|
ENSMUST00000166800
|
Slc6a20b-002 | retained_intron | Mus_musculus | 0 | 741 |
|
ENSMUST00000171647
|
Slc6a20a-002 | protein_coding | Mus_musculus | 0 | 418 |
|
ENSMUST00000163397
|
Slc6a20b-006 | nonsense_mediated_decay | Mus_musculus | 0 | 344 |
|
ENSMUST00000164241
|
Slc6a20b-005 | processed_transcript | Mus_musculus | 9e-33 | 145 |
