C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 6 (neurotransmitter transporter), member 20B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000166800 Slc6a20b-002 ENSMUSG00000025243 10090 - 9:123593820-123632399 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000166800
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000166800 0.034±0.02 0.036±0.01 0.014±0.00 0.101±0.05 0.029±0.01 0.069±0.02 0.013±0.01 11.347±3.52 0.146±0.10 0.055±0.01 0.016±0.01 0.070±0.05 0.037±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00073G CIL_00073G_0002 CGP 9:123529882-123632565

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000353278 SLC6A20-002 protein_coding Homo_sapiens 0 701
ENST00000358525 SLC6A20-001 protein_coding Homo_sapiens 0 1452
ENST00000413781 SLC6A20-007 protein_coding Homo_sapiens 0 741
ENST00000456124 SLC6A20-201 protein_coding Homo_sapiens 0 1452
ENST00000473146 SLC6A20-004 retained_intron Homo_sapiens 0 699
ENST00000493980 SLC6A20-005 processed_transcript Homo_sapiens 2.8026e-45 185

Loading