C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peptidylprolyl isomerase A (cyclophilin A) pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000414143 PPIAP2-001 ENSG00000227379 9606 - 20:25368275-25368766 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000414143
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000414143 0.033±0.00 0.138±0.00 0.224±0.00 0.070±0.00 0.486±0.39 0.032±0.00 0.349±0.00 0.108±0.05 0.126±0.04 0.060±0.00 0.586±0.73 0.125±0.01 0.215±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004MU CIL_0004MU_0002 CGP 20:25248069-25390983
CIL_0002A2 CIL_0002A2_0001 CGP 20:25294743-25452628

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000132846 Ppia-001 protein_coding Mus_musculus 0 617
ENSMUST00000075723 Gm10123-001 processed_pseudogene Mus_musculus 0 610
ENSMUST00000175860 Gm6061-001 processed_pseudogene Mus_musculus 0 606
ENSMUST00000120318 Gm13493-001 processed_pseudogene Mus_musculus 0 603
ENSMUST00000090749 Ppia-005 processed_transcript Mus_musculus 0 601
ENSMUST00000077747 Gm9234-201 processed_pseudogene Mus_musculus 0 590
ENSMUST00000119389 Gm14046-001 processed_pseudogene Mus_musculus 0 586
ENSMUST00000178933 Gm5558-201 processed_pseudogene Mus_musculus 0 577
ENSMUST00000119740 Gm12728-001 translated_processed_pseudogene Mus_musculus 0 566
ENSMUST00000155824 Ppia-003 retained_intron Mus_musculus 0 558
ENSMUST00000081336 Gm6065-201 processed_pseudogene Mus_musculus 0 547
ENSMUST00000177265 Gm5777-001 processed_pseudogene Mus_musculus 0 521
ENSMUST00000099961 Gm6043-201 processed_pseudogene Mus_musculus 0 521
ENSMUST00000137829 Ppia-002 retained_intron Mus_musculus 0 518
ENSMUST00000120735 Gm5883-001 processed_pseudogene Mus_musculus 0 496
ENSMUST00000118678 Gm13679-001 processed_pseudogene Mus_musculus 0 475
ENSMUST00000119751 Gm11469-001 processed_pseudogene Mus_musculus 0 473
ENSMUST00000186816 RP23-215C21.3-001 processed_pseudogene Mus_musculus 0 466
ENSMUST00000172723 Gm5967-001 processed_pseudogene Mus_musculus 0 436
ENSMUST00000119162 Gm15621-001 processed_pseudogene Mus_musculus 0 407
ENSMUST00000121223 Gm12632-001 processed_pseudogene Mus_musculus 0 379
ENSMUST00000117298 Gm12842-001 processed_pseudogene Mus_musculus 0 363
ENSMUST00000118166 Gm13454-001 processed_pseudogene Mus_musculus 0 239
ENSMUST00000069552 Gm5160-201 protein_coding Mus_musculus 0 189

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