C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Shwachman-Bodian-Diamond syndrome
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000414306 SBDS-005 ENSG00000126524 9606 - 7:66987744-66995576 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000414306
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000414306 16.587±0.00 40.829±0.00 12.477±0.00 17.832±0.00 32.550±0.00 16.229±0.00 15.043±0.00 58.388±0.00 29.073±0.00 39.323±0.00 11.562±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005UR CIL_0005UR_0001 CGP 7:66921225-66995601
CIL_0005US CIL_0005US_0001 CGP 7:66987677-67239519

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026387 Sbds-001 protein_coding Mus_musculus 0 878
ENSMUST00000139211 Sbds-002 nonsense_mediated_decay Mus_musculus 0 599

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