C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S5 pseudogene 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000414617 RPS5P3-001 ENSG00000215088 9606 - 21:33481580-33482195 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonHeartKidneyLiverMuscleOvaryTestisENST00000414617
Transcript ID Adipose Adrenal Brain Colon Heart Kidney Liver Muscle Ovary Testis
ENST00000414617 0.090±0.00 0.261±0.00 0.108±0.00 0.032±0.00 0.057±0.00 0.034±0.00 0.260±0.00 0.136±0.00 0.130±0.00 0.227±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00021F CIL_00021F_0001 CGP 21:33432485-33491720

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000004554 Rps5-001 protein_coding Mus_musculus 0 638
ENSMUST00000108539 Rps5-002 protein_coding Mus_musculus 0 638
ENSMUST00000137329 Rps5-004 protein_coding Mus_musculus 0 566
ENSMUST00000147435 Rps5-003 protein_coding Mus_musculus 0 566
ENSMUST00000139349 Rps5-006 retained_intron Mus_musculus 0 459

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