C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000414683  |
SEMA4A-007 |
ENSG00000196189 |
9606 | + |
1:156149723-156161493  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000898 | CIL_000898_0001 | VISTA | 1:155789635-156392759 |
| CIL_0008P5 | CIL_0008P5_0001 | VISTA | 1:155795688-156399252 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IEA | protein binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000169222
|
Sema4a-203 | protein_coding | Mus_musculus | 0 | 926 |
|
ENSMUST00000165898
|
Sema4a-201 | protein_coding | Mus_musculus | 0 | 926 |
|
ENSMUST00000166237
|
Sema4a-202 | protein_coding | Mus_musculus | 0 | 926 |
|
ENSMUST00000029700
|
Sema4a-001 | protein_coding | Mus_musculus | 0 | 926 |
|
ENSMUST00000184487
|
Sema4a-008 | nonsense_mediated_decay | Mus_musculus | 0 | 627 |
|
ENSMUST00000127436
|
Sema4a-004 | protein_coding | Mus_musculus | 0 | 619 |
|
ENSMUST00000107531
|
Sema4a-002 | protein_coding | Mus_musculus | 0 | 571 |
|
ENSMUST00000147200
|
Sema4a-005 | protein_coding | Mus_musculus | 0 | 525 |
|
ENSMUST00000185137
|
Sema4a-007 | nonsense_mediated_decay | Mus_musculus | 0 | 460 |
|
ENSMUST00000135732
|
Sema4a-006 | retained_intron | Mus_musculus | 0 | 425 |
|
ENSMUST00000184876
|
Sema4a-009 | nonsense_mediated_decay | Mus_musculus | 0 | 355 |
|
ENSMUST00000149145
|
Sema4a-014 | retained_intron | Mus_musculus | 0 | 193 |
