C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hydroxysteroid (17-beta) dehydrogenase 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000414835 HSD17B4-004 ENSG00000133835 9606 + 5:119452753-119542332 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartOvaryTestisENST00000414835
Transcript ID Adipose Breast Heart Ovary Testis
ENST00000414835 14.398±0.00 6.890±0.00 6.641±0.00 5.897±0.00 11.798±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004LE CIL_0004LE_0001 CGP 5:119268692-119637199
CIL_0004B4 CIL_0004B4_0001 CGP 5:119452443-119637199

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008152 IEA metabolic process
GO:0016491 IEA oxidoreductase activity
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025385 Hsd17b4-001 protein_coding Mus_musculus 0 2226
ENSMUST00000139502 Hsd17b4-004 retained_intron Mus_musculus 0 309
ENSMUST00000127325 Hsd17b4-003 retained_intron Mus_musculus 0 252

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