C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | eukaryotic translation initiation factor 6 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000415116  |
EIF6-004 |
ENSG00000242372 |
9606 | - |
20:35279740-35284786  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008EI | CIL_0008EI_0001 | VISTA | 20:35018152-35620688 |
| CIL_0002HV | CIL_0002HV_0001 | CGP | 20:35226654-35284985 |
| CIL_0002HS | CIL_0002HS_0001 | CGP | 20:35278907-35292401 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0042256 | IEA | mature ribosome assembly |
| GO:0043022 | IEA | ribosome binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000029142
|
Eif6-001 | protein_coding | Mus_musculus | 0 | 610 |
|
ENSMUST00000134278
|
Eif6-005 | protein_coding | Mus_musculus | 0 | 351 |
|
ENSMUST00000129830
|
Eif6-007 | nonsense_mediated_decay | Mus_musculus | 0 | 241 |
|
ENSMUST00000138962
|
Eif6-004 | retained_intron | Mus_musculus | 0 | 241 |
|
ENSMUST00000154841
|
Eif6-008 | nonsense_mediated_decay | Mus_musculus | 0 | 239 |
