C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002HS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000242372-ENSG00000125998 CGP 9606 20:35278907-35292401
GeneTranscriptPositionBiotype
ENSG00000125998 (FAM83C)
family with sequence similarity 83, member C 		ENST00000374408 (FAM83C-001) 35285731-35292401 protein_coding
ENSG00000235214 (FAM83C-AS1)
FAM83C antisense RNA 1 		ENST00000429167 (FAM83C-AS1-001) 35285251-35285756 antisense
ENSG00000242372 (EIF6)
eukaryotic translation initiation factor 6 		ENST00000374436 (EIF6-002) 35278911-35284715 protein_coding
ENST00000374443 (EIF6-005) 35278911-35284770 protein_coding
ENST00000374450 (EIF6-001) 35278911-35284985 protein_coding
ENST00000415116 (EIF6-004) 35279740-35284786 nonsense_mediated_decay
ENST00000440766 (EIF6-007) 35278911-35284523 nonsense_mediated_decay
ENST00000447927 (EIF6-003) 35278911-35284804 nonsense_mediated_decay
ENST00000456600 (EIF6-008) 35280698-35284985 protein_coding
ENST00000462894 (EIF6-006) 35280074-35284702 processed_transcript
ENST00000621148 (EIF6-201) 35278907-35284717 protein_coding
CIL_0002HS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027613-ENSMUSG00000074647 CGP 10090 2:155819832-155834854
GeneTranscriptPositionBiotype
ENSMUSG00000027613 (Eif6)
eukaryotic translation initiation factor 6 		ENSMUST00000029142 (Eif6-001) 155819832-155826925 protein_coding
ENSMUST00000109638 (Eif6-002) 155825166-155826663 protein_coding
ENSMUST00000129830 (Eif6-007) 155822837-155826436 nonsense_mediated_decay
ENSMUST00000134278 (Eif6-005) 155823875-155826766 protein_coding
ENSMUST00000134811 (Eif6-003) 155819837-155822480 processed_transcript
ENSMUST00000138962 (Eif6-004) 155822837-155826436 retained_intron
ENSMUST00000154841 (Eif6-008) 155820033-155826436 nonsense_mediated_decay
ENSMUSG00000074647 (Fam83c)
family with sequence similarity 83, member C 		ENSMUST00000029143 (Fam83c-001) 155827548-155834854 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002HS_0001ENSG00000125998ENST00000374408ENSG00000235214ENST00000429167ENSG00000242372ENST00000374436ENST00000374443ENST00000374450ENST00000415116ENST00000440766ENST00000447927ENST00000456600ENST00000462894ENST00000621148CIL_0002HS_0002ENSMUSG00000027613ENSMUST00000029142ENSMUST00000109638ENSMUST00000129830ENSMUST00000134278ENSMUST00000134811ENSMUST00000138962ENSMUST00000154841ENSMUSG00000074647ENSMUST00000029143
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002HS_0001ENSG00000125998ENST00000374408ENSG00000235214ENST00000429167ENSG00000242372ENST00000374436ENST00000374450ENST00000447927ENST00000621148CIL_0002HS_0002ENSMUSG00000027613ENSMUST00000029142ENSMUST00000109638ENSMUST00000134811ENSMUST00000154841ENSMUSG00000074647ENSMUST00000029143
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000125998 ENST00000374408 0.056±0.00 N/A N/A 0.036±0.00 N/A N/A 0.007±0.00 0.049±0.00 0.007±0.00 N/A N/A 0.468±0.53 0.031±0.02 0.274±0.10
ENSG00000235214 ENST00000429167 N/A N/A N/A N/A N/A N/A N/A 0.259±0.00 N/A N/A N/A N/A N/A 2.090±0.00
ENSG00000242372 ENST00000374436 N/A N/A N/A N/A N/A 11.881±0.00 0.959±0.00 N/A N/A N/A N/A 28.074±0.00 N/A 28.852±0.00
ENST00000374443 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000374450 N/A N/A N/A N/A N/A N/A 0.643±0.00 N/A N/A N/A N/A 68.330±0.00 N/A N/A
ENST00000415116 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000440766 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000447927 N/A 28.705±0.00 N/A N/A N/A 10.995±0.00 N/A 24.604±0.00 N/A N/A N/A 56.561±0.00 35.101±9.59 11.072±0.00
ENST00000456600 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462894 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621148 48.491±0.00 52.960±0.00 6.790±0.00 15.283±7.65 28.701±20.27 13.548±5.07 10.277±0.00 34.834±19.46 40.817±37.43 23.103±19.86 15.690±14.76 67.568±49.34 77.658±50.42 29.719±14.85
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027613 ENSMUST00000029142 43.770±2.71 69.279±3.03 28.674±2.26 26.582±10.18 46.408±14.13 166.332±7.07 17.387±1.92 52.334±2.54 40.233±4.81 49.432±4.75 15.811±0.95 54.766±23.37 32.329±13.75 18.054±7.59
ENSMUST00000109638 N/A N/A N/A 1.012±0.00 3.676±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134278 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134811 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.584±0.00 34.501±0.00 N/A
ENSMUST00000138962 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154841 N/A N/A N/A N/A N/A N/A 6.171±0.00 N/A 24.197±3.63 N/A N/A 27.887±1.61 37.213±4.71 N/A
ENSMUSG00000074647 ENSMUST00000029143 N/A N/A 1.723±0.08 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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